Board Thread:Versus Debates/@comment-28329451-20160501071244/@comment-25122992-20180106203413

Quite unlikely, since Jiraya's frog genjutsu only affected the 3 of 6 Pains in immediate vicinity, while the remaining 3 stayed intact and arrived as a backup for the defeated Pains. So, the genjutsu works only on the Path(s) caught into it directly and affects neither the other Paths nor the controller.